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Talk:MitoEAGLE protocols, terminology, documentation

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Participants

CountryCityContact
ArmeniaYerevanTrchounian K
AustraliaSydneyKrycer James R
AustraliaNedlandsFilipovska Aleksandra
AustraliaQueenslandHolland Olivia J
AustraliaParkvilleHardee Justin P
AustraliaQueenslandFisher Joshua J
AustraliaMelobourneBotella Javier
AustraliaSouthportVidimce Josif
AustraliaMelbourneWhitfield Jamie
AustraliaGeelong, VictoriaMcKenzie Matthew
AustraliaMelbourneStepto Nigel K
AustraliaMelbourne, VICMuccini Anna Maria
AustraliaNewtown, SydneyStocker Roland
AustraliaMelbourneSaner Nicholas
AustraliaQueenslandRadenkovic Filip
AustraliaQueenslandDong Lan-Feng
AustraliaVictoriaVan Bergen Nicole J
AustraliaClaytonWolff Jonci Nikolai
AustraliaSyndeyTon Riccardo
AustraliaMelbourneFerri Alessandra
AustraliaVictoriaWinwood-Smith Hugh
AustraliaMelbourneHewakapuge Sudinna
AustraliaMelbourneLionett S
AustraliaClayton VictoriaAlton Lesley
AustraliaMelbourneKuang Jujiao
AustraliaNedlandsPerks Kara L
AustraliaSydneyHoehn Kyle L
AustraliaMelbourneCassar Samantha
AustraliaMelbourneCoughlan Melinda T
AustraliaBurwoodTrewin Adam J
AustraliaMelbourneGenders Amanda J
AustriaInnsbruckHoppel Florian
AustriaInnsbruckDoerrier Carolina
AustriaInnsbruckKeller Markus A
AustriaInnsbruckThapa Maheshwor
AustriaInnsbruckSobotka Ondrej
AustriaInnsbruckPlangger Mario
AustriaInnsbruckSchartner Melanie
AustriaInnsbruckNindl Veronika
AustriaInnsbruckGarcia-Souza Luiz F
AustriaInnsbruckGoebel G
AustriaInnsbruckDi Marcello Marco
AustriaInnsbruckBergmeister Lisa
AustriaInnsbruckAntunes Diana
AustriaInnsbruckLaner Verena
AustriaKapferer Werner
AustriaInnsbruckKlocker Helmut
AustriaInnsbruckGnaiger Erich
AustriaInnsbruckGallee Leon
AustriaInnsbruckKarabatsiakis Alexander
AustriaInnsbruckCardoso Luiza HD
AustriaInnsbruckPerez Valencia Juan Alberto
AustriaAldransHaider Markus
AustriaInnsbruckPassrugger Manuela
AustriaInnsbruckSchmitt Sabine
AustriaInnsbruckSchwarzer Christoph
AustriaKlosterneuburgSazanov Leonid A
AustriaSalzburgKofler B
AustriaInnsbruckCecatto Cristiane
AustriaViennaKozlov Andrey V
AustriaInnsbruckMeszaros Andras T
AustriaInnsbruckBurtscher Martin
BelgiumBrusselsSonveaux P
BelgiumLeuven, FlandersBaekelandt V
BelgiumNamurArnould Thierry
BelgiumLiegeVotion Dominique-Marie
BelguimSart Tilman (Liège)Kruse C
BrasilPorto AlegreHaas Clarissa
BrasiliaLimeiraRopelle Eduardo R
BrazilRio de JaneiroOliveira Marcus F
BrazilSão PauloCrispim Marcell
BrazilRio de JaneiroGalina Antonio
BrazilSao PauloVercesi Anibal E
BrazilSanta Maria - RSGoncalves Debora Farina
BrazilSao PauloSilber Ariel Mariano
BrazilSanta Maria - Rio Grande do SulSoares Felix Alexandre Antunes
BrazilSão PauloKowaltowski Alicia J
BrazilRio de JaneiroVieyra Adalberto
BrazilJaboticabalOliveira Marcos Tulio
CanadaMontréalBreton Sophie
CanadaWinnipegChowdhury Subir Roy
CanadaMoncton, NBPichaud Nicolas
CanadaHamiltonScott Graham R
CanadaOttawaHarper Mary-Ellen
CanadaMontreal, QuebecBergdahl Andreas
CanadaEdmonton (Alberta)Lemieux Helene
CanadaEdmontonZaugg Michael
CanadaRimouskiMunro Daniel
CanadaSaint JohnPulinilkunnil Thomas
CanadaEdmontonHan Woo Hyun
CanadaVancouver, BCTausan Daniel
CanadaEdmontonLucchinetti Eliana
CanadaQuebecJoseph Vincent
CanadaHamiltonTarnopolsky Mark A
CanadaCharlottetownAdiele Reginald C
CanadaGuelphHolloway Graham P
CanadaRimouskiBlier Pierre U
CanadaOttawaDarveau Charles-A
CanadaAntigonishWeir M
CanadaVancouverBovard Josh
ChileCoyhaiqueJana Prado Fabian
ChinaXi`anLiu Jiankang
ChinaTianjinZhang Yong
ChinaPukou, Nanjing,Gan Zhenji
ChinaFuzhou, Fujian ProvinceChen Qi
CroatiaSplitLjubkovic M
CroatiaZagrebSaric A
CroatiaZagrebCurik I
CroatiaZagrebRubelj Ivica
Czech RepublicHradec KraloveKucera Otto
Czech RepublicPlzen -Severni predmestiJedlicka Jan
Czech RepublicPardubiceMajtnerova Pavlina
Czech RepublicCeske BudejoviceZikova Alena
Czech RepublicPardubiceHandl Jiri
Czech RepublicPraha 2Danhelovska Tereza
Czech RepublicHradec KraloveStankova Pavla
Czech RepublicHradec KraloveCervinkova Zuzana
Czech RepublicVestecEzrova Zuzana
Czech RepublicVestecRohlena Jakub
Czech RepublicPraha 2Zdrazilova Lucie
Czech RepublicPardubiceRousar Tomas
Czech RepublicPragueDrahota Zdenek
Czech RepublicVestecDavidova Eliska
Czech RepublicPragueKrizova J
Czech RepublicPragueHoustek Josef
Czech RepublicPrague 10Urban Tomas
Czech RepublicHradec KraloveEndlicher Rene
Czech repHradec KraloveFalaye T
DenmarkAarhus NJespersen Nichlas Riise
DenmarkCopenhagen NMortensen OH
DenmarkCopenhagenDela Flemming
DenmarkCopenhagenNielsen B
DenmarkHvidovreNehlin Jan O
DenmarkAarhus NBoetker Hans Erik
DenmarkCopenhagenLarsen Steen
DenmarkCopenhagenSoendergaard SD
DenmarkCopenhagenKraunsoee R
DenmarkCopenhagen NMaise Chroeis K
DenmarkCopenhagenGonzalez-Franquesa Alba
DenmarkCopenhagen NScheibye-Knudsen Morten
DenmarkRoskildeDalgaard Louise T
EgyptCairoAbdel-Rahman Engy Ali
EgyptCairoAli Sameh S
EstoniaTallinnPuurand Marju
EstoniaTallinnKaambre Tuuli
EstoniaTallinnLaasmaa Martin
EstoniaTallinnKlepinin Aleksandr
EstoniaTartuPaju Kalju
EstoniaTallinnKarro N
EstoniaTallinnTepp Kersti
EstoniaTallinnShevchuk Igor
EstoniaTallinnTruu Laura
EstoniaTallinnKlepinina Lyudmila
EstoniaTallinnVendelin Marko
FinlandTurkuStier Antoine
FinlandHelsinkiJackson Christopher Benjamin
FinlandHelsinkiSuomalainen Wartiovaara Anu
FinlandJyvaeskylaeKainulainen Heikki
FranceBordeauxAmoedo Nivea Dias
FranceAngersProcaccio Vincent
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FranceToursDumas Jean-Francois
FranceNouzillyCollin-Chenot Anne
FranceBordeaux cedexMourier A
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FranceLilleMontaigne David
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FranceMontpellierWrutniak-Cabello Chantal
FranceMartiniqueCano Sanchez Maria Consolacion
GermanyBiberach an der RißNold V
GermanyTuebingenKappler Lisa
GermanyFrankfurtWarnsmann Verena
GermanyGießenGrewal Rekha
GermanyCologneHo Dieu Hien
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GermanyGiessenSommer Natascha
GermanyUlmSchaefer PM
GermanyDuesseldorfJelenik T
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GermanyWilhelmshavenSalmon Pablo
GermanyHannoverDas Anibh Martin
GermanyMainzMethner Axel
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GermanyMunichZischka Hans
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GermanyMagdeburgSchoenfeld Peter
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GermanyDuesseldorfPiel Sarah
GermanyRegensburgRenner-Sattler Kathrin
GermanyCologneWiesner Rudolf J
GermanyWickert Anika
GermanyGießenSilaidos Carmina
GermanyFreiburgSchuele R
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GermanyRostockSokolova Inna
GermanyDuesseldorfHaendeler Judith
GermanyDoermann Niklas
GermanyDüsseldorfGoy C
GermanyMainzMaull Felicia
GermanyFrankfurtOsiewacz Heinz D
GermanyBremerhavenMark Felix Christopher
GermanyNeuherbergEiner C
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Greece15771Andreadou Ioanna
GreeceAthensTrougakos Ioannis P
GreeceThessalonikiLazou Antigone
GreeceHeraklionTavernarakis Nektarios
GreeceAthensGumeni Sentiljana
HungaryDebrecenVerebne Tar K
HungaryBudapestHorvath G
HungarySzegedFerdinandy Peter
HungaryBudapestChinopoulos Christos
HungaryBudapestTretter Laszlo
HungaryBudapestKomlodi Timea
HungarySzegedBoros Mihaly
IndiaNew DelhiVincent Vinnyfred
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IndiaHyderabadJha Rajan Kumar
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IndiaVaranasiSonkar Vijay K
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IranTehranShirazi Reza
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IrelandDublinPorter Richard K
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ItalyBolognaGenova Maria Luisa
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ItalyCataniaMessina Angela
ItalyRomeScatena Roberto
ItalyBolognaPaterlini S
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ItalyBolognaPorcelli AM
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ItalyBolzanoZanon Alessandra
ItalyBolognaGasparre G
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ItalyBariAttimonelli M
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JapanItabashi-ku TokyoTanaka Masashi
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LuxembourgStrassenDevaux Yvan
MalaysiaKuala LumpurHassan Hazirah
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MexicoTlalpanRodriguez-Enriquez Sara
MéxicoSan Pedro Garza García, Nuevo LeonGarcia-Rivas Gerardo
NetherlandsMaastrichtGrevendonk L
NetherlandsGA WageningenGrefte Sander
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PolandWarsawWieckowski Mariusz R
PolandWarsawSzewczyk Adam
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PolandWarsawBednarczyk Piotr
PolandWarsawWasilewski M
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The NetherlandsGroningenBakker Barbara M
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UKCanterbury, KentGourlay Campbell W
UKLondonLane Nick
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UKLondonBettinazzi Stefano
USALouisvilleMenze Michael A
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USALittle RockMacMillan-Crow Lee Ann
USAGainesvilleNeyroud D
USAOrlandoPino Maria F
USALa JollaSchilling Jan M
USAIowa CityWagner Brett A
USAAuroraMoreau Kerrie
USAMilwaukeeKandel Sunil Mani
USAWarminsterOrynbayeva Zulfiya
USAJupiterTrivigno Catherine
USANeedhamBrown David A
USANew HavenCavalcanti-de-Albuquerque Joao Paulo
USACambridgeWohlwend Martin
USABostonKristal Bruce S
USAKansas CityThyfault John P
USALittle RockParajuli Nirmala
USAMiamiFontanesi F
USAIndianapolisBrozinick Joseph T
USAWinston-SalemGonzalez-Armenta Jenny L
USACorvallisNewsom Sean A
USANew YorkGalkin Alexander
USAColumbusSims Carrie A
USAAtlantaJang Young Charles
USAClevelandHoppel Charles L
USAIowa CityChaurasia Bhagirath
USAFort CollinsChicco Adam J
USAFairbanksO'Brien Kristin
USATorranceRossiter Harry B
USARochesterNair K Sreekumaran
USAWinston-SalemAhn Bumsoo
USASan DiegoPatel Hemal H
USASt. LouisAbumrad Nada A
USAPuskarich Michael A
USABaltimoreGonzalez-Freire Marta
USAOrlandoSparks Lauren M
USAClevelandTandler Bernard
USAGainesvilleLeeuwenburgh Christiaan
USAStillwaterDavis Michael S
USABerkeleyWilliams Caroline M
USABirminghamMoellering Douglas R
USAPhiladelphiaTowheed Atif
USALa JollaValentine Joseph Marco
USAPhiladelphiaGanetzky Rebecca
USAPittsburghJurczak Michael J
USANorfolkLai Nicola
USASan Diego; La JollaMolina Anthony JA
USASeattleMarcinek DJ
USAAkronCohen Bruce H
USAEast LansingZhang Yizhu
USADavisHellgren Kim T
USARochesterLanza Ian R
USALos AngelesKwast Kurt E
USABethesdaFessel Joshua Patrick
USADavisAdams Sean H
USAProvoHancock Chad R
USASt. LouisPietka Terri A
USAPhiladelphiaJang David H
USAKansas CitySwerdlow Russell H
USAAuroraFord Ellen
USAAnn ArborTyrrell Daniel J
USAColorado SpringsJacobs RA
USASan DiegoCannon Daniel T
USAPittsburghProchownik Edward V
USAGalvestonDurham William J
USALouisvilleSkolik Robert A
USAWakefieldVarricchio Frederick
USAFayettevilleIyer Shilpa
USAOmahaKim Julian KS
USAMilwaukeeDash Ranjan K
USAFort CollinsLi Puma Lance C
USABaton RougeIrving Brian A
USAEast LansingBazil Jason N
USABethesdaSharma Pushpa
USADentonDzialowski Edward M
USAPortlandGarlid Keith D
USAOrlandoCoen Paul M
USAWinston-SalemTomar Dhanendra
USABaton RougeHand Steven C
USAOrlandoGoodpaster Bret H
USAChicagoDayanidhi Sudarshan
USAFayettevilleRao RR
USADenverVan Hove Johan
USAPhiladelphiaFalk Marni J
... further results


Comments and discussion

  1. We are mostly interested in two WG: (1) Since we are working mostly with heart and muscles, we are interested in WG 2 - MITOEAGLE data repository in muscle and other tissues. (2) WG 1 - Standard operating procedures and user requirement document: Protocols, terminology, documentation. Since we have an expertise in fatty acid metabolism, we are specially interested in experimental protocols for the evaluation of mitochondrial capacities regarding fatty acid metabolism. Of course our parts of the WG are also in our interest. - Marina Makrecka-Kuka, Edgars Liepinsh (2016).
  2. My role in Mito-EAGLE would be mainly in WG 2 and 4, with a focus on skeletal and cardiac muscle and cultured cardiomyocytes and endothelial cells. I would particularly like to bridge the gap between the group leaders and young investigators, trying to represent the young people who are the active users of the OROBOROS equipment. This will fit in nicely with the goals in WG1. ... Major congratulations on obtaining this beautiful collaborative grant! Very glad to see this network getting the recognition it deserves! Looking forward to being part of this! - Rob C Wuest (2016).
  3. Please, find enclosed my declaration to participate with my team in the following workgroups: WG1, WG2, WG3, WG4. We are now involved and have been in not a distant past – in studying of the following cell /tissue types:
    1. Blood cells, with particular emphasis on platelets and lymphocytes – isolated from animals and humans.
    2. Endothelial cells, fibroblasts, neurocytes (neuroblastoma), astrocytes, cancer cell lines – predominantly cultured.
    3. Hepatocytes, cardiomyocytes, cell isolated from brain – isolated from lab animals. - Cezary Watala (2016).
  4. I have already contacted the portuguese CNC to nominate me for the MC of theaction. Concerning my active participation, taking into account the type of work we do in my lab I could be included in all WGs. As you know we work with mitochondria from liver, muscle and fat, as well as cultured cells from different origins (WG2-4). The elaboration of SOPs (WG1) we can certainly contribute (see the book I edited on Mitochondrial Bioenergetics and in which you contribute a chapter). I believe that everybody can be part of the WG5, but as the coordinators of the action, you and Sandra should decide what is best for the success of the action. - Carlos Palmeira (2016).
  5. I would propose my participation in the WG1: Standard operating procedures and user requirement document: Protocols, terminology, documentation, considering that the goal of WG1 is to establish an integrated and analytic environment linking mitochondrial respiration with external data (cell physiology, anthropometry, spiroergometry, lifestyle, genomics) in the context of physical fitness evaluation and clinical diagnostics. I could give my active contribution in the phase of making platform that will aggregate the Action’s complete knowledge and provides the ability to make diagnostic profiling associated with diseases in particular tasks:
    1. Develop reccomendations for quality control, data reporting and data sharing beyond the published record. Develop concepts on Open Access and institutionalised service for data management, data mining and health-care conforming standards of data interpretation
    2. Provide a summary on strategic dissemination and an education programme for MITOEAGLE.
    3. Considering that we are in process of buying the oxygraph, thus broading capacities of my lab, I would be happy to open the door of my new lab for the innovative inter-laboratory ring test experiments and together with my team contribute in that phase of the MITOEAGLE Action. I look forward to the establishment of MitoGlobal EAGLE network where, as stated in the MoU, researchers will collaborate on mapping mitochondrial physiology and medicine. The creation of such a unique well-coordinated network of senior researchers and young investigators will definitely put an added value to existing data and publications, will increase quality and validity of the research, will bring new possibilities of data sharing and data mining and will hopefully bring us to the era of more economical research by saving resources through standardised and harmnonised protocols, where the measuremnts will not be wasted due to lack of comparability. - Nebojsa Lalic (2016).
  6. Our research interest is oriented to reproductive endocrinology; especially to mechanisms that govern steroidogenesis of testicular Leydig cells in disturbed homeostasis. We use several in vivo models:
    1. stress -/+ systemic or intratesticular blockade of different stress receptors (alpha1ADR; betaADR; GR)
    2. hypogonadal-hypogonadism -/+ testosterone-replacement therapy
    3. androgens anabolics treatment -/+ blockade od AR
    4. aged rats -/+ Viagra-treatment
    5. biological clock - Silvana Andric (2016).
  7. I took a look to the MoU and the different working groups. You know well my research focus and having this into account I am interested in actions related to Working group 1 (Respirometric reference protocols, Interlaboratory proficiency test, Instrumental platforms). Working group 2 and 3: I have generated multiple mitochondrial respiration data sets in different mouse tissues (mainly in skeletal muscle, hypothalamus, liver and white adipose tissue). Currently we are also performing these assays in white adipose tissue from human patients. Hence I am interested in all milestones of WG 2 and 3. WG 5 is related to WG 1 and as you know I have interest in training, dissemination and also together with my collaborators (if needed) we could help with data sets and a data interpretation. Overall, I have a general interest on this Action and my active role in MITOEAGLE could be discussed. I could be of help participating in some of the tasks where my expertise and interest fit best. We will be forming and interdisciplinary research group with four group leaders: JC Perales, R Guimera, M Sales-Pardo and PM Garcia-Roves with two different affiliations, University of Barcelona (JCP and PMG-R - Energy metabolism) and University Rovira I Virgili (RG and MS – Data base, statistics, data mining). - Pablo M Garcia-Roves (2016).
  8. I will be pleased to contribute to the tasks of WG1 by developing interlaboratory proficiency tests and instrumental platform comparison. Moreover, as a (potential) MC member of MitoEAGLE I can also offer visibility to the Action itself (i.e. WG5: MITOEAGLE dissemination and training, according to mitoglobal.org webpages) by establishing new interactions with the International Coenzyme Q10 Association (ICQA) where I act as a member of the Executive Committee. ICQA organizes biennal conferences on new highlights of Coenzyme Q research. In 2015, we held the conference in Bologna (http://conference2015.wix.com/icqaconference) and we included in the program also some scientific sessions dedicated to mitochondrial bioenergetics and diseases. I will be pleased to enforce cooperation between ICQA and MitoEAGLE. - Maria Luisa Genova (2016).
  9. We found the scientific content and objectives of the call very interesting and compatible with our wide expertise on oxysterol analysis in food and biological systems. Our group has a large experience on lipid composition and their degradation products (volatile and non-volatile), as well as on sensory analysis. Moreover, we are currently involved in the H2020-GERI-2014-1 project "PLOTINA" ("Promoting gender balance and inclusion in research, innovation and training") with Prof. Gallina Toschi (in cc) as coordinator; the project actually includes gendered case studies where gender and sex variables are considered. You can find further information about our expertises, publications and the PLOTINA project at the following webpages: https://www.unibo.it/sitoweb/maria.rodriguez/, https://www.unibo.it/sitoweb/tullia.gallinatoschi/, http://www.unibo.it/en/research/projects-and-initiatives/research-projects-horizon-2020-1/plotina - Maria Teresa Rodriguez Estrada (2016).
  10. As you know, our current/developing interests are with "evolution" (species comparisons) and "environment" (hypoxia and cold exposure), but have also experience and interest in assessing effects of "lifestyle" (diet, exercise) and "aging" as well (in rodents). - Adam J Chicco (2016).
  11. Congratulations on the considerable progress with MITOEAGLE! I am keen to participate in this exciting project and I’m sure I can make a valuable contribution to it's success. I have extensive experience performing respirometry assays in human muscle biopsies, myoblasts/tubes and mouse tissues in the contexts of aging, obesity, exercise and inactivity. I feel that I could contribute to any of the five working groups, but particularly to WG2, WG4, and WG5. I am also happy and willing to serve on the Management Committee if needed. Again, congratulations on organizing such an exciting project. - Paul M Coen (2016).
  12. I would be interested to be involved with WG1 and WG2. In particular, I am interested in contributing to developing protocols for multicenter quality control among labs, and for permeabilized muscle bundle respirometry. - Harry B Rossiter (2016).
  13. I think that we could contribute via participation in the evaluation of the protocols, and helping to develop them further. In addition, we have been working on the establishing a database that would allow us to keep protocol details, cell isolation and several other aspects. There is nothing very advanced, but we could contribute to establishing such data collection practice. In addition, we, as opposed to many others, happen to use Strathkelvin respirometer. This alternative hardware would allow us to verify whether the protocols work on them as well. - Marko Vendelin (2016).


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