Semantic search

From Bioblast
 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Marie 2018 Cell Death Dis2018Marie M, Bigot K, Angebault C, Barrau C, Gondouin P, Pagan D, Fouquet S, Villette T, Sahel JA, Lenaers G, Picaud S (2018) Light action spectrum on oxidative stress and mitochondrial damage in A2E-loaded retinal pigment epithelium cells. Cell Death Dis 9:287.LEAK
OXPHOS
ET		N
S
NS		Permeabilized cellsEndothelial;epithelial;mesothelial cell
Mark 2012 Abstract BioblastMark FC, Strobel A, Poertner HO (2012) Ocean warming and acidification – when fish mitochondria turn sour. Mitochondr Physiol Network 17.12.LEAK
ROUTINE
OXPHOS		N
S
CIV
NS		Permeabilized tissue
Isolated mitochondria		FishesHeart
Liver
Markova 2016 Abstract MitoFit Science Camp 2016Porcine hearts samples preparation: PBI-Shredder or saponin?N
S
NS		Permeabilized tissue
Homogenate		PigHeart
Markova 2017 MiP2017
Michaela Markova

Porcine sepsis and associated myocardial depression.

LEAK
OXPHOS		N
S
CIV
NS
ROX		PigHeart
Markova 2017 MiPschool Obergurgl
Michaela Markova

Mitochondrial respiration in the rat left heart ventricle after inhibition of pyruvate dehydrogenase kinase.

LEAK
OXPHOS		N
S
CIV
NS
ROX		HomogenateRatHeart
Markovic 2022 Biomedicines2022Marković A, Tauchmannová K, Šimáková M, Mlejnek P, Kaplanová V, Pecina P, Pecinová A, Papoušek F, Liška F, Šilhavý J, Mikešová J, Neckář J, Houštěk J, Pravenec M, Mráček T (2022) Genetic complementation of ATP synthase deficiency due to dysfunction of TMEM70 assembly factor in rat. https://doi.org/10.3390/biomedicines10020276LEAK
OXPHOS
ET		F
N
S
NS		HomogenateRatHeart
Liver
Marquez 2020 J Am Heart Assoc2020Marquez AM, Morgan RW, Ko T, Landis WP, Hefti MM, Mavroudis CD, McManus MJ, Karlsson M, Starr J, Roberts AL, Lin Y, Nadkarni V, Licht DJ, Berg RA, Sutton RM, Kilbaugh TJ (2020) Oxygen exposure during cardiopulmonary resuscitation is associated with cerebral oxidative injury in a randomized, blinded, controlled, preclinical trial. J Am Heart Assoc 9:015032.LEAK
OXPHOS
ET		N
S
CIV
NS		HomogenatePigNervous system
Marrocco 2020 Thesis2020Marrocco A (2020) Alterations of CCSP expression and macrophages metabolism in the development of silica-induced pulmonary inflammation and fibrosis. PhD Thesis 108.LEAK
OXPHOS
ET		S
ROX		Intact cellsMouseMacrophage-derived
Martell 2023 Nat Commun2023Martell E, Kuzmychova H, Kaul E, Senthil H, Chowdhury SR, Morrison LC, Fresnoza A, Zagozewski J, Venugopal C, Anderson CM, Singh SK, Banerji V, Werbowetski-Ogilvie TE, Sharif T (2023) Metabolism-based targeting of MYC via MPC-SOD2 axis-mediated oxidation promotes cellular differentiation in group 3 medulloblastoma. https://doi.org/10.1038/s41467-023-38049-9LEAK
ROUTINE
OXPHOS
ET		N
S
CIV
ROX		Permeabilized cells
Intact cells		HumanNervous system
Martinez 2018 Arch Biochem Biophys2018Martínez JH, Fuentes F, Vanasco V, Alvarez S, Alaimo A, Cassina A, Coluccio Leskow F, Velazquez F (2018) Alpha-synuclein mitochondrial interaction leads to irreversible translocation and complex I impairment. Arch Biochem Biophys 651:1-12.LEAK
OXPHOS
ET		N
S
ROX		Isolated mitochondriaRatNervous system
Martins 2018 Oxid Med Cell Longev2018Martins IK, de Carvalho NR, Macedo GE, Rodrigues NR, Ziech CC, Vinadé L, Filho VMB, Menezes IA, Franco J, Posser T (2018) Anacardium microcarpum promotes neuroprotection dependently of AKT and ERK phosphorylation but does not prevent mitochondrial damage by 6-OHDA. Oxid Med Cell Longev 2018:2131895.LEAK
OXPHOS
ET		N
S
NS
ROX		HomogenateChickenNervous system
Matallo MiP2010Matallo J, Reich V, Calzia E, Radermacher P, Groeger M (2010) Interactions between sulfide and mitochondrial respiration in cultured murine alveolar macrophage. Abstract. MiP2010.OXPHOS
ET		N
S		Permeabilized cellsLung;gill
Macrophage-derived
Mathers 2017 J Comp Physiol B2017Mathers KE, McFarlane SV, Zhao L, Staples JF (2017) Regulation of mitochondrial metabolism during hibernation by reversible suppression of electron transport system enzymes. J Comp Physiol B 187:227-34.LEAK
OXPHOS		N
S
CIV
ROX
DQ		Intact cells
Isolated mitochondria		Other mammalsLiver
Matsumoto 2018 Circulation2018Matsumoto J, Takada S, Kinugawa S, Furihata T, Nambu H, Kakutani N, Tsuda M, Fukushima A, Yokota T, Tanaka S, Takahashi H, Watanabe M, Hatakeyama S, Matsumoto M, Nakayama KI, Otsuka Y, Sabe H, Tsutsui H, Anzai T (2018) Brain-derived neurotrophic factor improves limited exercise capacity in mice with heart failure. Circulation 138:2064-66.LEAK
ET		N
S
NS		Permeabilized tissueMouseSkeletal muscle
Mavroudis 2018 Eur J Cardiothorac Surg2018Mavroudis CD, Karlsson M, Ko T, Hefti M, Gentile JI, Morgan RW, Plyler R, Mensah-Brown KG, Boorady TW, Melchior RW, Rosenthal TM, Shade BC, Schiavo KL, Nicolson SC, Spray TL, Sutton RM, Berg RA, Licht DJ, Gaynor JW, Kilbaugh TJ (2018) Cerebral mitochondrial dysfunction associated with deep hypothermic circulatory arrest in neonatal swine. Eur J Cardiothorac Surg 54:162-68.LEAK
ET
OXPHOS		N
S
CIV
NS
ROX		HomogenatePigNervous system
Mayayo-Vallverdu 2023 Redox Biol2023Mayayo-Vallverdú C, López de Heredia M, Prat E, González L, Espino Guarch M, Vilches C, Muñoz L, Asensi MA, Serra C, Llebaria A, Casado M, Artuch R, Garrabou G, Garcia-Roves PM, Pallardó FV, Nunes V (2023) The antioxidant l-Ergothioneine prevents cystine lithiasis in the Slc7a9-/- mouse model of cystinuria. https://doi.org/10.1016/j.redox.2023.102801LEAK
OXPHOS
ET		N
S
NS
ROX		Permeabilized tissueMouseKidney
Mayer 2018 Endocrinology2018Mayer AL, Zhang Y, Feng EH, Higgins CB, Adenekan O, Pietka TA, Beatty WL, DeBosch BJ (2018) Enhanced hepatic PPARα activity links GLUT8 deficiency to augmented peripheral fasting responses in male mice. Endocrinology 159:2110-26.OXPHOS
ET		N
S
NS
ROX		Permeabilized tissue
Homogenate		MouseSkeletal muscle
Liver
Mayeuf-Louchart 2019 Cell Rep2019Mayeuf-Louchart A, Lancel S, Sebti Y, Pourcet B, Loyens A, Delhaye S, Duhem C, Beauchamp J, Ferri L, Thorel Q, Boulinguiez A, Zecchin M, Dubois-Chevalier J, Eeckhoute J, Vaughn LT, Roach PJ, Dani C, Pederson BA, Vincent SD, Staels B, Duez H (2019) Glycogen dynamics drives lipid droplet biogenesis during brown adipocyte differentiation. Cell Rep 29:1410-18.LEAK
OXPHOS		F
N
S
NS		Permeabilized cellsMouseFat
Mayeur 2013 PhD Thesis2013Mayeur S (2013) Retard de croissance intra-utérin et vulnérabilité au syndrome métabolique: recherche de marqueurs placentaires dans un modèle de dénutrition maternelle prénatale et chez l'Homme. PhD Thesis 1-225.LEAK
OXPHOS
ET		N
S
CIV
NS
ROX		Isolated mitochondriaRatGenital
Mayr 2004 Pediatr Res2004Mayr JA, Paul J, Pecina P, Kurnik P, Forster H, Fotschl U, Sperl W, Houstek J (2004) Reduced respiratory control with ADP and changed pattern of respiratory chain enzymes as a result of selective deficiency of the mitochondrial ATP synthase. Pediatr Res 55:988-94.LEAK
OXPHOS		SPermeabilized tissueHumanHeart
Skeletal muscle
Fibroblast
Mazaki 2019 Biochem Biophys Res Commun2019Mazaki Y, Takada S, Nio-Kobayashi J, Maekawa S, Higashi T, Onodera Y, Sabe H (2019) Mitofusin 2 is involved in chemotaxis of neutrophil-like differentiated HL-60 cells. Biochem Biophys Res Commun 513:708-13.OXPHOSN
S		Permeabilized cellsHumanBlood cells
Mazzoli 2019 Nutrients2019Mazzoli A, Crescenzo R, Cigliano L, Spagnuolo MS, Cancelliere R, Gatto C, Iossa S (2019) Early hepatic oxidative stress and mitochondrial changes following western diet in middle aged rats. Nutrients 11:E2670.LEAK
OXPHOS
ET		N
S
NS
ROX		HomogenateRatLiver
Mazzoli 2021 Antioxidants (Basel)2021Mazzoli A, Spagnuolo MS, Nazzaro M, Gatto C, Iossa S, Cigliano L (2021) Fructose removal from the diet reverses inflammation, mitochondrial dysfunction, and oxidative stress in hippocampus. Antioxidants (Basel) 10:487.LEAK
OXPHOS
ET		N
S
NS
ROX		HomogenateRatNervous system
Mazzoli 2021 Nutrients2021Mazzoli A, Gatto C, Crescenzo R, Cigliano L, Iossa S (2021) Prolonged changes in hepatic mitochondrial activity and insulin sensitivity by high fructose intake in adolescent rats. Nutrients 13:1370.LEAK
OXPHOS
ET		N
S
NS
ROX		HomogenateRatLiver
McCommis 2015 Cell Metab2015McCommis KS, Chen Z, Fu X, McDonald WG, Colca JR, Kletzien RF, Burgess SC, Finck BN (2015) Loss of mitochondrial pyruvate carrier 2 in the liver leads to defects in gluconeogenesis and compensation via pyruvate-alanine cycling. Cell Metab 22:682-94.OXPHOSN
S		Permeabilized cells
Isolated mitochondria		MouseLiver
McCommis 2020 Nat Metab2020McCommis KS, Kovacs A, Weinheimer CJ, Shew TM, Koves TR, Ilkayeva OR, Kamm DR, Pyles KD, King MT, Veech RL, DeBosch BJ, Muoio DM, Gross RW, Finck BN (2020) Nutritional modulation of heart failure in mitochondrial pyruvate carrier-deficient mice. Nat Metab 2:1232-47. https://doi.org/10.1038/s42255-020-00296-1LEAK
OXPHOS		F
N
S
NS		Permeabilized tissue
Isolated mitochondria		MouseHeart
McCurdy 2016 JCI Insight2016McCurdy CE, Schenk S, Hetrick B, Houck J, Drew BG, Kaye S, Lashbrook M, Bergman BC, Takahashi DL, Dean TA, Nemkov T, Gertsman I, Hansen KC, Philp A, Hevener AL, Chicco AJ, Aagaard KM, Grove KL, Friedman JE (2016) Maternal obesity reduces oxidative capacity in fetal skeletal muscle of Japanese macaques. JCI Insight 1:e86612.LEAK
OXPHOS
ET		F
N
S
NS		Permeabilized tissueOther mammalsSkeletal muscle
McKenna 2021 Redox Biol2021McKenna HT, O'Brien KA, Fernandez BO, Minnion M, Tod A, McNally BD, West JA, Griffin JL, Grocott MP, Mythen MG, Feelisch M, Murray AJ, Martin DS (2021) Divergent trajectories of cellular bioenergetics, intermediary metabolism and systemic redox status in survivors and non-survivors of critical illness. Redox Biol 41:101907.LEAK
OXPHOS
ET		F
N
S
NS
ROX		Permeabilized tissueHumanSkeletal muscle
McLaughlin 2018 Biochem Biophys Res Commun2018McLaughlin KL, McClung JM, Fisher-Wellman KH (2018) Bioenergetic consequences of compromised mitochondrial DNA repair in the mouse heart. Biochem Biophys Res Commun 504:742-48.N
S
F		Isolated mitochondriaMouseHeart
McLaughlin 2020 Sci Rep2020McLaughlin KL, Kew KA, McClung JM, Fisher-Wellman KH (2020) Subcellular proteomics combined with bioenergetic phenotyping reveals protein biomarkers of respiratory insufficiency in the setting of proofreading-deficient mitochondrial polymerase. Sci Rep 10:3603.LEAKF
N
S		Isolated mitochondriaMouseHeart
Skeletal muscle
McLaughlin 2020b Sci Rep2020McLaughlin KL, Hagen JT, Coalson HS, Nelson MAM, Kew KA, Wooten AR, Fisher-Wellman KH (2020) Novel approach to quantify mitochondrial content and intrinsic bioenergetic efficiency across organs. Sci Rep 10:17599.LEAK
OXPHOS
ET		F
N
S
Gp
CIV
ROX		Isolated mitochondriaMouseHeart
Liver
Kidney
Fat
McMurray 2019 FASEB J2019McMurray F, MacFarlane M, Kim K, Patten DA, Wei-LaPierre L, Fullerton MD, Harper ME (2019) Maternal diet-induced obesity alters muscle mitochondrial function in offspring without changing insulin sensitivity. FASEB J 33:13515-26.LEAK
OXPHOS		F
N
S
CIV
ROX		Permeabilized tissueMouseSkeletal muscle
Melenovsky 2016 Eur J Heart Fail2016Melenovsky V, Petrak J, Mracek T, Benes J, Borlaug BA, Nuskova H, Pluhacek T, Spatenka J, Kovalcikova J, Drahota Z, Kautzner J, Pirk J, Houstek J (2016) Myocardial iron content and mitochondrial function in human heart failure: a direct tissue analysis. Eur J Heart Fail 19:522-30.N
S		HomogenateHumanHeart
Melin 2022 JHEP Rep2022Melin N, Yarahmadov T, Sanchez-Taltavull D, Birrer FE, Brodie TM, Petit B, Felser A, Nuoffer JM, Montani M, Vozenin MC, Herrmann E, Candinas D, Aebersold DM, Stroka D (2022) A new mouse model of radiation-induced liver disease reveals mitochondrial dysfunction as an underlying fibrotic stimulus. https://doi.org/10.1016/j.jhepr.2022.100508LEAK
OXPHOS
ET		N
S
CIV
NS
ROX		Permeabilized cellsMouseLiver
Melo Hanchuk 2015 Cell Signal2015Melo Hanchuk TD, Papa PF, La Guardia PG, Vercesi AE, Kobarg J (2015) Nek5 interacts with mitochondrial proteins and interferes negatively in mitochondrial mediated cell death and respiration. Cell Signal 27:1168-77.LEAK
OXPHOS		N
S
CIV
ROX		Permeabilized cellsHumanHEK
Menail 2023 FASEB J2023Menail HA, Cormier SB, Léger A, Robichaud S, Hebert-Chatelain E, Lamarre SG, Pichaud N (2023) Age-related flexibility of energetic metabolism in the honey bee Apis mellifera. https://doi.org/10.1096/fj.202300654rLEAK
OXPHOS
ET		N
S
Gp
CIV
NS
ROX		Permeabilized tissueHexapods
Mendham 2021 Diabetologia2021Mendham AE, Goedecke JH, Zeng Y, Larsen S, George C, Hauksson J, Fortuin-de Smidt MC, Chibalin AV, Olsson T, Chorell E (2021) Exercise training improves mitochondrial respiration and is associated with an altered intramuscular phospholipid signature in women with obesity. Diabetologia 64:1642-59.LEAK
OXPHOS
ET		F
N
S
NS
ROX		Intact cellsHumanSkeletal muscle
Menezes-Filho 2018 Biochim Biophys Acta Bioenerg2018Menezes-Filho SL, Amigo I, Luévano-Martínez LA, Kowaltowski AJ (2018) Fasting promotes functional changes in liver mitochondria. Biochim Biophys Acta Bioenerg 1860:129-35.OXPHOS
ET		N
S		Isolated mitochondriaMouseLiver
Meng 2021 FEBS Open Bio2021Meng L, Chen D, Meng G, Lu L, Han C (2021) Dysregulation of the Sirt5/IDH2 axis contributes to sunitinib resistance in human renal cancer cells. FEBS Open Bio 11:921-31.LEAK
OXPHOS
ET		N
S
CIV
NS
ROX		Permeabilized cellsHumanKidney
Merz 2017 Intensive Care Med Exp2017Merz T, Vogt JA, Wachter U, Calzia E, Szabo C, Wang R, Radermacher P, McCook O (2017) Impact of hyperglycemia on cystathionine-γ-lyase expression during resuscitated murine septic shock. Intensive Care Med Exp 5:30.LEAK
OXPHOS
ET		F
N
S
NS
ROX		HomogenateMouseLiver
Merz 2018 Intensive Care Med Exp2018Merz T, Wepler M, Nußbaum B, Vogt J, Calzia E, Wang R, Szabo C, Radermacher P, McCook O (2018) Cystathionine-γ-lyase expression is associated with mitochondrial respiration during sepsis-induced acute kidney injury in swine with atherosclerosis. Intensive Care Med Exp 6:43.LEAK
OXPHOS
ET		F
N
S
NS
ROX		HomogenatePigKidney
Meszaros 2017 MiPschool Obergurgl
Andras Meszaros

(Very) High-resolution respirometry – a deep dive into oxygen dependence of mitochondrial respiration.

LEAK
OXPHOS		N
S		Isolated mitochondriaMouseLiver
Nervous system
Kidney
Meszaros 2022 EBioMedicine2022Meszaros AT, Hofmann J, Buch ML, Cardini B, Dunzendorfer-Matt T, Nardin F, Blumer MJ, Fodor M, Hermann M, Zelger B, Otarashvili G, Schartner M, Weissenbacher A, Oberhuber R, Resch T, Troppmair J, Öfner D, Zoller H, Tilg H, Gnaiger E, Hautz T, Schneeberger S (2022) Mitochondrial respiration during normothermic liver machine perfusion predicts clinical outcome. https://doi.org/10.1016/j.ebiom.2022.104311OXPHOS
ET
LEAK		F
N
S
NS
ROX		HomogenateHumanLiver
Meszaros 2024 Transpl Int2024Meszaros AT, Weissenbacher A, Schartner M, Egelseer-Bruendl T, Hermann M, Unterweger J, Mittelberger C, Reyer BA, Hofmann J, Zelger BG, Hautz T, Resch T, Margreiter C, Maglione M, Komlódi T, Ulmer H, Cardini B, Troppmair J, Öfner D, Gnaiger E, Schneeberger S, Oberhuber R (2024) The predictive value of graft viability and bioenergetics testing towards the outcome in liver transplantation. Transpl Int 37. https://doi.org/10.3389/ti.2024.12380LEAK
OXPHOS
ET		N
S
NS
F
ROX		HomogenateHumanLiver
Mezera 2016 Oxid Med Cell Longev2016Mezera V, Endlicher R, Kucera O, Sobotka O, Drahota Z, Cervinkova Z (2016) Effects of epigallocatechin gallate on tert-butyl hydroperoxide-induced mitochondrial dysfunction in rat liver mitochondria and hepatocytes. Oxid Med Cell Longev 7573131:8pp.LEAK
OXPHOS		N
S		Permeabilized cells
Isolated mitochondria		RatLiver
MiPNet12.01 Suppl T-issue2018-11-18
O2k-Protocols contents

MitoPathways at the Q-junction: mouse skeletal muscle fibers.

LEAK
ROUTINE
ET		N
S
NS
ROX		Permeabilized tissueMouseSkeletal muscle
MiPNet12.11 MitoRespiration2014-02-20
O2k-Protocols

Flux control ratios in isolated mitochondria. OXPHOS capacity and respiratory control.

SIsolated mitochondriaArtemia
Crustaceans
MiPNet17.03 Shredder vs Fibers2015-06-18
O2k-Protocols

Mitochondrial respiration in permeabilized fibers versus homogenate from fish liver and heart. An application study with the PBI-Shredder.

LEAK
OXPHOS
ET		N
S
NS		HomogenateFishesHeart
Liver
MiPNet18.05 Amplex-Mouse-heart2019-06-24
O2k-Protocols

O2k-Fluorometry: HRR and H2O2 production in mouse cardiac tissue homogenate.

LEAK
OXPHOS
ET		N
S
NS		HomogenateMouseHeart
MiPNet20.13 Safranin mt-membranepotential2019-06-24
O2k-Protocols

O2k-FluoRespirometry: HRR and simultaneous determination of mt-membrane potential with safranin or TMRM.

LEAK
ET		S
ROX		HomogenateMouseNervous system
Retrieved from "https://wiki.oroboros.at/index.php/Special:Ask"
Cookies help us deliver our services. By using our services, you agree to our use of cookies.
More information
Powered by MediaWiki
Powered by Semantic MediaWiki